Your AVR does have preouts ("Main outs"):
http://www.son-video.com/images/static/Rayons/HomeCinema/AmpliAV/Yamaha/RXV1000bg.gif
It sounds from your above system setup description that you are using the main outs from the AVR, connected to your Sonic Frontier/Aragons to drive your Front L/R speakers.
If so, then your V1000 is only driving the center and surrounds.
How long have you had this setup? Is the AVR shutting down recent?
http://www.son-video.com/images/static/Rayons/HomeCinema/AmpliAV/Yamaha/RXV1000bg.gif
It sounds from your above system setup description that you are using the main outs from the AVR, connected to your Sonic Frontier/Aragons to drive your Front L/R speakers.
If so, then your V1000 is only driving the center and surrounds.
How long have you had this setup? Is the AVR shutting down recent?