SirSpeedy,
Any chance it's mistracking? (I know you'd have recognized that, but thought I'd cover all the bases.)
Diagnostic question: do these pops happen in both channels or just one?
I'd put a small wager on a loose connection at the cartridge pin(s). Check those carefully for tightness and clean the pins and clips. For cleaning gold, see the last paragraph.
We had a similar LP-only problem last winter, in the R channel only, which made diagnosis easier. Turned out to be slightly spread connectors in one pin holder of one tube socket in the phono stage. I tightened the two clips carefully with a fine tweezers and the problem was resolved. So when you pull your tubes check the connectors in each hole before reinstalling, and clean all the pins and pin holders of course.
For cleaning gold connectors Paul recommends (and we use) a very gentle rubbing with a paper towel. Nothing stronger or more expensive is needed, nor does it require any chemicals. Gold oxidizes in a layer that's basically one molecule thick and it only takes a gentle buffing to remove. Do NOT use a Magic Eraser! ;-)
Good luck,
Doug