The intriguing thing about the whole Green Pen and painting the outer edge of the CD or the CD tray with green ink, the complementary color of red, thing is that the CD laser is essentially invisible light in the near infrared part of the spectrum. Thus theoretically at least green or any other color should have no affect on the sound since infrared light, being invisible, has no complementary color that could absorb it (before it makes its way into the photodetector).
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