You definitely have to get a stereo integrated amp with HT bypass, even the ones that has no HT bypass feature you can always use a stereo analog audio input on the stereo integrated amp and set the volume at 80 out of 100. 80 is usually a reference for unity gain necessary for HT bypass mode.
If you need a built-in DAC in the stereo integrated amp I would highly recommend either the Rotel RA-1592 ($2500) or the new Parasound Halo Integrated ($2500 to $3k). They both have good quality sounding DAC especially for the money.
With these stereo integrated amps, not only you get much better quality amplifier section for your main front L/R speakers but you also get much better quality stereo preamp and DAC as well. For stereo music playbacks these integrated amps will sound way better than your Yamaha receiver or any receivers period.