I definitely want an RF set up so I can hide it completely. I can live with the "stick-on" IR emitters too, but there are a couple blaster versions as well.
I saw this great URC remote and RF station the other day at a local retailer. $500+!! And then $300+ more for programming both units?! That's absurd. URC does have a consumer package offering though for less then $100 at Amazon. There's also a not too expensive Harmony set up.
What about apps for iPhone or iPad to use as a remote with an IR/RF repeater?