So indeed it is the same board. ICEPower 1200AS2. Comparing pictures, the only REAL difference, is the AC transformer has more "vibration isolation goo" packed between the windings and the core/cage.While the high's are still not as pronounced, the bass is significantly more pronounced.
Strange all should be the same with just a mains trany change, unless some small damage was done to both channels of the Class-D board which limits the HF and gives the impression the bass is up.
By any chance did you listen to one of your other amps while this was getting repaired?
Cheers George