First, a 12AU7 is not a lower gain 12AX7 replacement. A 5751 is although it is still more gain than a 12AU7.
A little more experimenting may help you figure out where your ground loop is. If the JD9 has a ground pin in the AC connector try floating it. Also try leaving the Oppo's RCA cables hooked up but disconnect the video cable. Sometimes the ground loop can be traced back to the TV chassis.
BTW, what specifically was the last upgrade done before you noticed the hum?
A little more experimenting may help you figure out where your ground loop is. If the JD9 has a ground pin in the AC connector try floating it. Also try leaving the Oppo's RCA cables hooked up but disconnect the video cable. Sometimes the ground loop can be traced back to the TV chassis.
BTW, what specifically was the last upgrade done before you noticed the hum?