Very likely it is simply a matter of ported speakers and the sound is lower frequency than the port tuning frequency on the speakers.
When you have sounds below the tuned port frequecny of your speakers then the woofers flap around uncontrollably and make almost no sound, which is exactly what you have. Sadly, this flapping around will add plenty of IMD distortion to any music you play becuase the speaker drivers are operating way way outside their linear range when they pop out of the speaker in the way you have observed - look for a big port on your speaker probably tuned around 30 Hz to maximize bass extension...
Either you can filter out all the LF electronically or select a different design of speaker...
When you have sounds below the tuned port frequecny of your speakers then the woofers flap around uncontrollably and make almost no sound, which is exactly what you have. Sadly, this flapping around will add plenty of IMD distortion to any music you play becuase the speaker drivers are operating way way outside their linear range when they pop out of the speaker in the way you have observed - look for a big port on your speaker probably tuned around 30 Hz to maximize bass extension...
Either you can filter out all the LF electronically or select a different design of speaker...