The nice thing about separates is that you can often place your amps near the speakers, keeping your speaker cables short. Tube amps are more sensitive to speaker cables; keeping them short helps out with resolution. If you decide you want more power/resolution/etc. its not that hard to change out a preamp or amp, as opposed to an integrated setup.
The other advantage of separates is each bit of the system does not share the same power supply (which reduces distortion) and crosstalk is simply going to be lower.
I'm with millercarbon about tone controls. I think you'll find that once the system has proper resolution and a musical nature that tone controls are no longer needed. One thing about tone controls- their introduction into the circuit will **always** increase noise, decrease resolution and bandwidth, introduce coloration and distortion. That's a thing you can count on. The reason is that tone controls require an active circuit to make up for the gain that they otherwise consume. Additionally even when the controls are set flat they often aren't really flat unless they are switched like Harmon Kardon did on their Citation 1 preamp. If the tone controls can be switched out that is helpful, but I've serviced a lot of amps where that switch was actually the problem- due to corrosion of the contacts, even on a newer piece.
The other advantage of separates is each bit of the system does not share the same power supply (which reduces distortion) and crosstalk is simply going to be lower.
I'm with millercarbon about tone controls. I think you'll find that once the system has proper resolution and a musical nature that tone controls are no longer needed. One thing about tone controls- their introduction into the circuit will **always** increase noise, decrease resolution and bandwidth, introduce coloration and distortion. That's a thing you can count on. The reason is that tone controls require an active circuit to make up for the gain that they otherwise consume. Additionally even when the controls are set flat they often aren't really flat unless they are switched like Harmon Kardon did on their Citation 1 preamp. If the tone controls can be switched out that is helpful, but I've serviced a lot of amps where that switch was actually the problem- due to corrosion of the contacts, even on a newer piece.