Just spoke to leonard at ARC:
Ref 3 is a truly differential design. No splitters/inverters are used to simulate balanced operations. Two 6H30 tubes are used for the positive signal, and two for the return signal. If the Ref 3 is switched to SE operation through the remote control, a relay switch is activate which turns off the return signal on the XLR connectors and takes the 6H30 tubes responsible for the return signal out of the active circuit. Leonard suggests that if single ended operations are desired, the user should employ RCA ICs instead of balanced ones. However, he confirms that turning off the balanced signal on XLR, or using RCA connectors will still result in a 'good' sound with a predictable loss of 6DB of gain. This 'good' sound will however be noisier, slightly flat, and pinched, if compared to the sound of Ref 3 in a fully balanced configuration.
One further note, according to Leonard, the 6550C tube employed on Ref 3 is in fact an original SED Wing 6550 manufactured in the St. Petersburg plant, rather than the lesser pseudo-Svetlana equivalent.