After confirming and reconfirming both subs were hooked up correctly thru the hi level inputs and with identical cabling for both, I concluded that something was wrong with the louder of the two because if I disconnected one of the high level connectors from the amp, it then sounded just like the other one. I pulled out by trusty Fluke DMM meter and measured the input impedance of the high level cables connected to the hi level input. With the louder REL, the measured impedance from GND to one leg was 9.6k ohms and the other was 19k. The other sub measured 65k ohms on both legs!
I removed the louder REL amp and a close inspection revealed nothing amiss, all connections were solid. I removed the other amp for comparison and that too showed nothing amiss but I did notice that the wiring from the balanced input, the hi level input and the balanced single input were different. Since these were different rev amps, I didn't give it much thought.
After giving it some thought, I hooked up the hi level cable to the balanced hi input on the louder REL and repeated the measurements and now got 65k from both legs to GND! Not sure if this was a miswire issue or a rev. change but with one REL hooked up normally thru the hi level input and the louder one hooked up to the hi level balanced input, the output from both was now identical with the same volume/crossover settings and the "rubbery/boomy" sound was gone.
Ken