You can insert some Harrison Laboratory fMod hi pass filters into the line (RCA) from your pre amp to the amp(s) driving your main speakers.
They have hi-pass cutoffs at a range of frequencies and aren't too expensive so you can get some at 30, 50, 70, 100hz.... I got the 50 and 70's when I put some subs on my system. 70 seemed to work best for me. They filter at 12db per octave so you still get some music below the cutoff level.
That'll take stress off your main amp(s) and leave those frequencies and below to your bass array.