Interesting, trying to understand how this would work.
Is this what you mean?
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1. Don't do anything to the existing (built-in) crossover.
2. send a regular signal to the "high" speaker input.
(Source->Preamp->Amp->HSI)
3. use the miniDSP to process the signal that goes to the "low" speaker input.
(Source->Preamp->miniDSP->Amp->LSI)
Thanks,
Ted