Maybe the most likely reason - for now - is that I took out the platter and reinstalled it, with a little change of the ball and spindle position, making the drive work a bit more smoothly.
However my "audio intuition" is not quite satisfied with this explanation. The pumping error seems more like a yes/no proposition, as if you throw a switch - it is there, or not there - maybe mainly resonance-related (or even electric, e g could it even be influenced by static electricity?). So far I have not been able to reproduce the error. So I dont know exactly what makes the woofers start pumping. But it seems fairly clear that if it was only the drive, or player imperfections, the pumping / rumble problems would have been much more constant.