#1 - Fact is you had no choice but to replace the tubes since the first unit took them out in the first place..
#2- no it should have nothing to do with a warranty putting different but correct tubes in the unit.
#3- at the VERY least the dealer should provide you with a brand new set of Stock tubes free of charge, as the manufacturer does have at least a 90 day warranty or so on tubes period I would assume, you have done nothing wrong with trying to correct a problem from the get go and make it better considering the only reason you put NOS tubes in the unit was the originals turned to toast on a brand new unit which you would not even considered doing it this early I am sure..
It seems if the dealer is giving you an issue on this then it is not explained to them correctly that THEIR Stock unit was toasting itself in the first place, and you just tried to rectify it, however you need to realize your loss in the NOS tubes is not their responsibility.. But the Stock Tubes absolutley are, and they can take the unit back, re-tube with stock, and refund you and take their chances on selling it again on their own.. You should have a 30 day return policy with them anyway.